I find it very difficult to say that I hate something that Jesus loves, cares for and gave his life to save. I understand that people are referring to "Church" as traditions, or rituals, or clubs of highly respected moral people. And they really aren't talking about the body of believers transformed by their encounter with the risen Christ. But I don't think you would ever hear Jesus say that he hates Church.
Let us love the Church with the same passion that our Savior and Lord does. Let's us seek its increase and pray that it will bring Glory to our great God!
Ephesians 3:20 Now to him who is able to do immeasurably more than all we ask or imagine, according to his power that is at work within us, 21 to him be glory in the church and in Christ Jesus throughout all generations, for ever and ever! Amen.